PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I00882.2.p
Common NameEUGRSUZ_I00882, LOC104418534
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 346aa    MW: 37407.4 Da    PI: 10.0493
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I00882.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.54.8e-32274331359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp ++++tYegeHnh+
  Eucgr.I00882.2.p 274 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERASDDPAMLIVTYEGEHNHS 331
                       9*************************988****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.6E-18225270IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.808.7E-34260331IPR003657WRKY domain
PROSITE profilePS5081131.479267333IPR003657WRKY domain
SuperFamilySSF1182905.1E-27269331IPR003657WRKY domain
SMARTSM007743.8E-39272332IPR003657WRKY domain
PfamPF031061.0E-27274330IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAVELMLGYR NDTTFSAKME ETAVKEAASG LESVGKLIKL LSHSQIQHPP AQEAPPLDLD  60
RDCRAVADDA VSKFKNVISL LGRTRTGHAR FRRAPVQSAL DKLPGQHPHQ PKIYYATPIQ  120
QIPPTPAPVP ALPLGHYGGS AVISKSNGVV GERRDSSTTI SFSDASFPFG SSLTADNISG  180
NVNYNNVNER HVVVKQQQCS SSSTFQITSS SISGKPPLSS SSSLKRKCSS ETLGSGRCAS  240
SSGRCHCSKK RKLRLKRVVR VPAISLKMAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSS  300
VRGCPARKHV ERASDDPAML IVTYEGEHNH SLSVVDSTSL ILESS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-22260332273WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I00882.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010028208.10.0PREDICTED: probable WRKY transcription factor 15 isoform X2
SwissprotO221763e-83WRK15_ARATH; Probable WRKY transcription factor 15
TrEMBLA0A059AMB70.0A0A059AMB7_EUCGR; Uncharacterized protein
STRINGPOPTR_0007s10670.11e-131(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.12e-45WRKY DNA-binding protein 15